Publications

Lead Laboratory

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Thermophilic Chassis-Enabled High-Throughput Selection of a Thermostable Fluorogenic Reporter

Shin, S., Triola, E.H., Granja-Travez, R.S., et al. (2025). ACS Synthetic Biology.

Metabolic engineering and synthetic biology for the environment: from perspectives of biodetection, bioremediation, and biomanufacturing

Jiang, T., Montgomery, V.A., Jetty, K., et al. (2025). Biotechnology for the Environment.

Production of triacetic acid lactone from oleic acid by engineering the yeast Candida viswanathii

Ghosh, S., Hutagalung, A., Gao, Y., et al. (2025). Microbial Cell Factories.

Semi-automated biofoundry workflows for sequence coevolution-guided isoprene synthase engineering

Emelianov, G., Song, D.U., Kamath, A., et al. (2025). Trends in Biotechnology.

Strong Translation Elongation Factor 1-Alpha (tef1α) Promoter Reporter Systems for Aspergillus niger

Yuan, G., Serrano-Zayas, T., Dai, Z., et al. (2025). ACS Synthetic Biology.

Discovering methylated DNA motifs in bacterial nanopore sequencing data with MIJAMP

Tidwell, A. K., Faust, E., Eckert, C., et al. (2025). Journal of Industrial Microbiology and Biotechnology.

From bench to biofactory: high-throughput technologies and automated workflows to accelerate biomanufacturing

Petzold, C., Mukhopadhyay, A. (2025). Current Opinion in Biotechnology.

Machine learning prediction of enzyme optimum pH

Gado, J., Knotts, M., Shaw, A., et al. (2025). Nature Machine Intelligence.

Machine learning-led semi-automated medium optimization reveals salt as key for flaviolin production in Pseudomonas putida

Zournas, A., Incha, M., Radivojevic, T., et al. (2025). Communications Biology.

Retrobiosynthesis of unnatural lactams via reprogrammed polyketide synthase

Lee, N., Schmidt, M., Li, C., et al. (2025). Nature Catalysis.

Recent developments of oleaginous yeasts toward sustainable biomanufacturing

Adamczyk, P., Jiang, T., Jetty, K., et al. (2025). Current Opinion in Biotechnology.

The oleaginous yeast Rhodosporidium toruloides engineered for biomass hydrolysate-derived (E)-α-bisabolene production

Adamczyk, P., Hwang, H. J., Chang, T., et al. (2025). Metabolic Engineering.

Tunable and Degradable Dynamic Thermosets from Compatibilized Polyhydroxyalkanoate Blends

Ling, C., Clarke, R., Rosetto, G., et al. (2025). ACS Sustainable Chemistry & Engineering.

Scalable, biologically sourced depolymerizable polydienes with intrinsically weakened carbon–carbon bonds

Hu, Q., Luo, X., Ogunfowora, L. A., et al (2025). Nature Chemical Engineering.