Lead Laboratory
Publication Date
Vision and Development of a Design, Implementation, and Verification Automation (DIVA) Software Platform for DNA Construction
Plahar, H., Lane, S.D., Stawski, N., et al. (2026). ACS Synthetic Biology.
Evading native restriction-modification systems improves electroporation efficiency of the methanotroph Methylococcus capsulatus Bath
Yu, Y.C., Tumen-Velasquez, M., Vergara, M.M., et al. (2026). Applied and Environmental Microbiology.
Engineering and Application of a Thermostable MHETase for PET Depolymerization
Murphy, N.P., Gado, J.E., Neumann, T., et al. (2026). ACS Sustainable Chemistry & Engineering.
Metric-driven biosensors for analyte detection
Granja-Travez, R.S., Shin, S.M., Miller, J.E., et al. (2026). Current Opinion in Biotechnology.
Integrating machine learning tools in protein design: a case of MHETase engineering for PET biodeconstruction
Granja-Travez, R.S., Dale, T., Jha, R.K. (2026). Protein Engineering, Design and Selection.
Expanding the genetic toolkit: adenine and cytosine base editors for gene disruption in Aspergillus niger
Yuan, G., Deng, S., Dai, Z., et al. (2026). Microbial Cell Factories.
Quantitative Dissection of Agrobacterium Virulence to Generate a Synthetic Ti Plasmid
Thompson, M.G., Kirkpatrick, L.D., Szarzanowicz, M.J., et al. (2026). ACS Synthetic Biology.
Host analysis-guided selection and targeted engineering (HASTE) of Lipomyces tetrasporus for the conversion of CO2-derived feedstocks
Xiao, Z., Czajka, J.J., Alvarez, J., et al. (2026). Bioresource Technology.
Prediction of non-intuitive metabolic targets with bayesian metabolic control analysis to improve 3-hydroxypropionic acid production in Aspergillus niger
Dai, Z., Zucker, J., Han, Y., et al. (2026). Front. Bioeng. Biotechnol..
Building an expanded bio-based economy through synthetic biology
Garza Elizondo, A.M., Del Valle Kesra, I., Teixeira Prates, E., et al. (2025). Biotechnology Advances.
Perspectives for artificial intelligence in bioprocess automation
Helleckes, L.M., Putz, S., Gupta, K., et al. (2025). Current Opinion in Biotechnology.
Thermophilic Chassis-Enabled High-Throughput Selection of a Thermostable Fluorogenic Reporter
Shin, S., Triola, E.H., Granja-Travez, R.S., et al. (2025). ACS Synthetic Biology.
Metabolic engineering and synthetic biology for the environment: from perspectives of biodetection, bioremediation, and biomanufacturing
Jiang, T., Montgomery, V.A., Jetty, K., et al. (2025). Biotechnology for the Environment.
Production of triacetic acid lactone from oleic acid by engineering the yeast Candida viswanathii
Ghosh, S., Hutagalung, A., Gao, Y., et al. (2025). Microbial Cell Factories.
Staying productive under pressure: systems evaluations of β-carotene production in Yarrowia lipolytica under continuous fermentation
Worland, A.M., Xu, V.A., Duran, M.F., et al. (2025). Trends in Biotechnology.
Inducible flippase-mediated metabolic engineering of Rhodosporidium toruloides for enhanced 3-hydroxypropionic acid production from corn stover hydrolysate
Hwang, H.J., Adamczyk, P.A., Gladden, J.M., et al. (2025). Bioresource Technology.
Semi-automated biofoundry workflows for sequence coevolution-guided isoprene synthase engineering
Emelianov, G., Song, D.U., Kamath, A., et al. (2025). Trends in Biotechnology.
Machine Learning-Guided Identification of PET Hydrolases from Natural Diversity
Norton-Baker, B., Komp, E., Gado, J.E., et al. (2025). ACS Catalysis.
FluxRETAP: A REaction TArget Prioritization Genome-Scale Modeling Technique for Selecting Genetic Targets
Czajka, J., Kim, J., Tang, Y., et al. (2025). Bioinformatics.
Strong Translation Elongation Factor 1-Alpha (tef1α) Promoter Reporter Systems for Aspergillus niger
Yuan, G., Serrano-Zayas, T., Dai, Z., et al. (2025). ACS Synthetic Biology.