PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements

Laboratories: Argonne National Laboratory, Lawrence Berkeley National Laboratory, Oak Ridge National Laboratory, Pacific Northwest National Laboratory, Sandia National Laboratories

High-throughput genetic engineering of nonmodel and undomesticated bacteria via iterative site-specific genome integration

Laboratories: Oak Ridge National Laboratory

Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering

Laboratories: National Renewable Energy Laboratory, Oak Ridge National Laboratory, Pacific Northwest National Laboratory

Machine-learning from Pseudomonas putida KT2440 transcriptomes reveals its transcriptional regulatory network

Laboratories: Argonne National Laboratory, Lawrence Berkeley National Laboratory, National Renewable Energy Laboratory, Oak Ridge National Laboratory

Approaches to genetic tool development for rapid domestication of non-model microorganisms

Laboratories: Oak Ridge National Laboratory

High-Throughput Large-Scale Targeted Proteomics Assays for Quantifying Pathway Proteins in Pseudomonas putida KT2440

Laboratories: National Renewable Energy Laboratory, Oak Ridge National Laboratory, Pacific Northwest National Laboratory, Sandia National Laboratories

Engineered Pseudomonas putida simultaneously catabolizes five major components of corn stover lignocellulose: Glucose, xylose, arabinose, p-coumaric acid, and acetic acid

Laboratories: Oak Ridge National Laboratory

Engineered Pseudomonas putida KT2440 co-utilizes galactose and glucose

Laboratories: Oak Ridge National Laboratory

Engineering glucose metabolism for enhanced muconic acid production in Pseudomonas putida KT2440

Laboratories: Los Alamos National Laboratory, National Renewable Energy Laboratory, Oak Ridge National Laboratory

Eliminating a global regulator of carbon catabolite repression enhances the conversion of aromatic lignin monomers to muconate in Pseudomonas putida KT2440

Laboratories: National Renewable Energy Laboratory, Oak Ridge National Laboratory